9QCG
Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 4 at room temperature
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM07 |
Synchrotron site | ESRF |
Beamline | BM07 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2023-04-20 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97951 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 75.305, 75.305, 270.065 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 17.900 - 2.390 |
R-factor | 0.2651 |
Rwork | 0.263 |
R-free | 0.30890 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.457 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.550 |
High resolution limit [Å] | 2.390 | 2.390 |
Rmerge | 0.648 | 4.549 |
Number of reflections | 58746 | 10401 |
<I/σ(I)> | 4.19 | 0.43 |
Completeness [%] | 99.9 | |
Redundancy | 14 | |
CC(1/2) | 0.992 | 0.323 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2M potassium citrate tribasic monohydrate, 17% PEG3350 |