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9Q2Y

Phosphodiesterase from Burkholderia phage BCSR5 in the open lid conformation

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyPIXEL
Collection date2025-06-29
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths72.513, 74.800, 76.727
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.080 - 2.030
R-factor0.2283
Rwork0.227
R-free0.24480
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.814
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.0802.080
High resolution limit [Å]2.0302.030
Rmerge0.166
Number of reflections276512023
<I/σ(I)>12
Completeness [%]100.0
Redundancy8.8
CC(1/2)0.9970.385
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52980.2 M magnesium acetate tetrahydrate, 0.1 M sodium cacodylate trihydrate, pH 6.5, 20% w/v PEG8000

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PDB entries from 2025-12-03

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