9PUF
Crystal Structure of N-Phenylalanine Peptoid-modified Collagen Triple Helix (GPX)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-E |
| Synchrotron site | APS |
| Beamline | 24-ID-E |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-04 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97918 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 113.541, 24.081, 15.029 |
| Unit cell angles | 90.00, 94.50, 90.00 |
Refinement procedure
| Resolution | 56.595 - 1.297 |
| R-factor | 0.1495 |
| Rwork | 0.147 |
| R-free | 0.16820 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | collagen peptide |
| Data reduction software | XDS (Feb 5, 2021) |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 56.600 | 56.600 | 1.320 |
| High resolution limit [Å] | 1.290 | 7.090 | 1.290 |
| Rmerge | 0.151 | 0.062 | 0.653 |
| Rmeas | 0.158 | 0.064 | 0.684 |
| Rpim | 0.044 | 0.018 | 0.200 |
| Total number of observations | 128471 | 812 | 4551 |
| Number of reflections | 10169 | 72 | 418 |
| <I/σ(I)> | 11.6 | 22.8 | 2.9 |
| Completeness [%] | 98.9 | 99.1 | 85.6 |
| Redundancy | 12.6 | 11.3 | 10.9 |
| CC(1/2) | 0.998 | 1.000 | 0.877 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 294 | protein in water at 5 mg/ml mixed 50:50 with 40% (v/v) PEG 600, 100 mM Imidazole/Hydrochloric acid pH8.0, 200 mM Zinc acetate |






