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9PMM

Crystal structure of C. elegans PUF-3 in complex with RNA I-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-04
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 61
Unit cell lengths158.328, 158.328, 40.500
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.840 - 2.150
R-factor0.1804
Rwork0.178
R-free0.21600
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.821
Data reduction softwareHKL-2000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.190
High resolution limit [Å]2.1502.150
Rmerge0.1140.822
Rmeas0.1250.910
Rpim0.051
Number of reflections321031556
<I/σ(I)>15.12
Completeness [%]99.7
Redundancy5.9
CC(1/2)0.9900.651
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2960.2 M sodium malonate, pH 5.0, 20% (w/v) PGE 3350

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