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9PL8

The structure of O-glycopeptidase BcM60C from Bacteroides caccae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-13
DetectorDECTRIS PILATUS 200K
Wavelength(s)1.5418
Spacegroup nameP 41 21 2
Unit cell lengths118.605, 118.605, 90.930
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.830 - 1.550
R-factor0.1861
Rwork0.185
R-free0.20990
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.052
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.580
High resolution limit [Å]1.5501.550
Rmeas0.0890.569
Rpim0.0260.263
Number of reflections939924620
<I/σ(I)>27.52.4
Completeness [%]99.8
Redundancy7.8
CC(1/2)0.9970.855
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.2M (NH4)2 SO4, 0.1M Na citrate pH5.6, 21% PEG4000

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