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9PJ4

Crystal structure of u-1,2 Peroxo Intermediate from pABA synthase Nitrosomonas urea CADD (NuCADD)

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-09
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.000, 1.730
Spacegroup nameC 1 2 1
Unit cell lengths107.523, 37.217, 81.079
Unit cell angles90.00, 120.37, 90.00
Refinement procedure
Resolution34.980 - 2.070
R-factor0.1946
Rwork0.190
R-free0.23830
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.804
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.110
High resolution limit [Å]2.0702.070
Rmerge0.0350.221
Rmeas0.0410.262
Rpim0.0220.139
Number of reflections30838823
<I/σ(I)>30.13.6
Completeness [%]94.694.5
Redundancy3.43.3
CC(1/2)0.9920.971
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52910.1M HEPES pH 7.5, 0.2 M NaCl, 25% P3350

258009

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