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9P8W

Anti-phage dGTPase from Shewanella putrefaciens CN-32

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2025-02-28
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979200
Spacegroup nameP 63 2 2
Unit cell lengths121.718, 121.718, 151.483
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution75.740 - 2.680
R-factor0.211
Rwork0.208
R-free0.26580
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.488
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21_5207)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]105.4102.810
High resolution limit [Å]2.6802.680
Rmerge0.3782.970
Rmeas0.387
Rpim0.0840.658
Number of reflections192332502
<I/σ(I)>11.91.9
Completeness [%]99.9100
Redundancy3940.1
CC(1/2)0.8530.853
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293.150.2 M magnesium chloride, 0.1 M HEPES-NaOH, pH 7.5, 30% PEG400

246031

PDB entries from 2025-12-10

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