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9OKX

16mer self-complementary duplex RNA with dG:C pair sequence 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.3
Synchrotron siteALS
Beamline5.0.3
Temperature [K]99
Detector technologyPIXEL
Collection date2024-06-28
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.97648
Spacegroup nameH 3 2
Unit cell lengths41.511, 41.511, 124.629
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.543 - 1.375
Rwork0.177
R-free0.21540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.859
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.400
High resolution limit [Å]1.3751.375
Rmerge0.0670.494
Rmeas0.0720.548
Rpim0.0270.232
Number of reflections8922405
<I/σ(I)>262.8
Completeness [%]99.596.2
Redundancy7.25.2
CC(1/2)0.9720.861
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.82930.4 M Sodium chloride, 0.12 M Calcium chloride, 20 mM MES pH 5.8, 27% v/v (+/-)-2-Methyl-2,4-pentanediol

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PDB entries from 2025-12-10

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