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9OKT

16mer self-complementary duplex RNA with dA:U pair sequence 2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]99
Detector technologyPIXEL
Collection date2024-12-22
DetectorDECTRIS PILATUS3 2M
Wavelength(s)0.97741
Spacegroup nameH 3 2
Unit cell lengths41.006, 41.006, 123.438
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.128 - 1.320
Rwork0.183
R-free0.20650
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle2.297
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.340
High resolution limit [Å]1.3201.320
Rmerge0.0600.511
Rmeas0.0640.543
Rpim0.0210.180
Number of reflections9461417
<I/σ(I)>30.34
Completeness [%]96.988.7
Redundancy9.48.6
CC(1/2)0.9920.902
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52930.08 M Sodium chloride, 0.02 M Magnesium chloride hexahydrate, 0.04 M Sodium cacodylate trihydrate pH 5.5, 35% v/v (+/-)-2-Methyl-2,4-pentanediol, 0.002 M Hexammine cobalt(III) chloride

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PDB entries from 2025-12-10

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