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9O0D

crystal structure of rSAMD9 tRNase domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-08
DetectorDECTRIS PILATUS 300K
Wavelength(s)0.97918
Spacegroup nameP 21 21 2
Unit cell lengths107.984, 142.486, 83.133
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.476 - 2.391
R-factor0.2302
Rwork0.228
R-free0.27710
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.394
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.490
High resolution limit [Å]2.3912.391
Rmerge0.0811.138
Number of reflections510394618
<I/σ(I)>13.4
Completeness [%]99.893.7
Redundancy6.3
CC(1/2)0.9940.738
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72930.2 M Magnesium formate dihydrate, 20% w/v Polyethylene glycol 3,350, 0.1M Hepes, pH 7.0.

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