9O01
Crystal structure of AfOgg1-D140N mutant bound to 8-OG DNA duplex in an intermediate state
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL11-1 |
| Synchrotron site | SSRL |
| Beamline | BL11-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2002-04-01 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.11699 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 52.013, 52.839, 53.459 |
| Unit cell angles | 90.00, 100.46, 90.00 |
Refinement procedure
| Resolution | 40.520 - 1.950 |
| R-factor | 0.2252 |
| Rwork | 0.221 |
| R-free | 0.25980 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.712 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.520 | 1.990 |
| High resolution limit [Å] | 1.950 | 1.950 |
| Rmerge | 0.120 | 1.870 |
| Number of reflections | 20265 | 1176 |
| <I/σ(I)> | 7.1 | |
| Completeness [%] | 96.3 | |
| Redundancy | 3.4 | |
| CC(1/2) | 0.996 | 0.215 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 298 | 20-30% PEG4000, 100 mM MES, pH 6.5, 5% potassium permanganate (saturated) |






