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9NEH

The 1.48 Angstrom crystal structure of galactose oxidase variant with genetically incorporated Cl2-Tyr495

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2020-06-17
DetectorADSC QUANTUM 210r
Wavelength(s)0.97919
Spacegroup nameC 1 2 1
Unit cell lengths97.716, 89.019, 86.254
Unit cell angles90.00, 117.96, 90.00
Refinement procedure
Resolution48.560 - 1.480
R-factor0.1616
Rwork0.161
R-free0.17670
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.963
Data reduction softwareDENZO
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.21.2-5419))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.510
High resolution limit [Å]1.4803.6501.480
Rmerge0.0790.0460.969
Rmeas0.0880.0511.116
Rpim0.0390.0220.545
Number of reflections10773573117009
<I/σ(I)>5.9
Completeness [%]99.999.998.5
Redundancy4.954
CC(1/2)0.9970.536
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529510% PEG 6000, 0.1 M CaCl2, 5% glycerol, 10 mM N-Acetylglucosamine and 50 mM acetic acid

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