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9NDR

The 1.22 Angstrom crystal structure of galactose oxidase variant with genetically incorporated F2-Tyr495

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-01-22
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameC 1 2 1
Unit cell lengths97.148, 88.913, 85.845
Unit cell angles90.00, 117.97, 90.00
Refinement procedure
Resolution48.280 - 1.220
R-factor0.16
Rwork0.160
R-free0.17100
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.856
Data reduction softwareDENZO
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.21_5207-000))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.250
High resolution limit [Å]1.2203.0101.220
Rmerge0.1380.1190.502
Rmeas0.1570.1360.569
Rpim0.0750.0650.265
Total number of observations856627
Number of reflections1879631282112553
<I/σ(I)>5.6
Completeness [%]98.499.298.8
Redundancy4.64.84.5
CC(1/2)0.9670.9640.768
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529510% PEG 6000, 0.1 M CaCl2, 5% glycerol, 10 mM N-Acetylglucosamine and 50 mM acetic acid

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