9NDR
The 1.22 Angstrom crystal structure of galactose oxidase variant with genetically incorporated F2-Tyr495
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-01-22 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97946 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 97.148, 88.913, 85.845 |
| Unit cell angles | 90.00, 117.97, 90.00 |
Refinement procedure
| Resolution | 48.280 - 1.220 |
| R-factor | 0.16 |
| Rwork | 0.160 |
| R-free | 0.17100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.856 |
| Data reduction software | DENZO |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.21_5207-000)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.250 |
| High resolution limit [Å] | 1.220 | 3.010 | 1.220 |
| Rmerge | 0.138 | 0.119 | 0.502 |
| Rmeas | 0.157 | 0.136 | 0.569 |
| Rpim | 0.075 | 0.065 | 0.265 |
| Total number of observations | 856627 | ||
| Number of reflections | 187963 | 12821 | 12553 |
| <I/σ(I)> | 5.6 | ||
| Completeness [%] | 98.4 | 99.2 | 98.8 |
| Redundancy | 4.6 | 4.8 | 4.5 |
| CC(1/2) | 0.967 | 0.964 | 0.768 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295 | 10% PEG 6000, 0.1 M CaCl2, 5% glycerol, 10 mM N-Acetylglucosamine and 50 mM acetic acid |






