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9MZ7

Crystal Structure of 19b Fab bound to the third variable (V3) loop peptide from the HIV-1 92BR020 envelope (Env) glycoprotein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-11-03
DetectorDECTRIS PILATUS 6M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths46.572, 81.454, 134.160
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution51.780 - 1.940
R-factor0.2223
Rwork0.220
R-free0.26890
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.535
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]51.7801.990
High resolution limit [Å]1.9401.940
Rmerge0.107
Number of reflections377352569
<I/σ(I)>11
Completeness [%]98.6
Redundancy5.8
CC(1/2)0.9970.767
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2950.18 M Ammonium sulfate, 0.09 M Sodium acetate trihydrate pH 4.6, 27% w/v Polyethylene glycol monomethyl ether 2,000 , 10% v/v glycerol

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