9MM2
Crystal structure of bacterial pectin methylesterase PmeC5 from B. fibrisolvens D1T
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-12 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.953722 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.297, 61.950, 77.369 |
Unit cell angles | 90.00, 105.39, 90.00 |
Refinement procedure
Resolution | 41.780 - 1.330 |
R-factor | 0.12068 |
Rwork | 0.120 |
R-free | 0.14014 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.899 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0425) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.660 | 1.350 |
High resolution limit [Å] | 1.330 | 1.330 |
Rmerge | 0.049 | 0.301 |
Rmeas | 0.053 | 0.326 |
Rpim | 0.020 | 0.123 |
Total number of observations | 624009 | 30348 |
Number of reflections | 89955 | 4440 |
<I/σ(I)> | 23.3 | 5.8 |
Completeness [%] | 99.4 | |
Redundancy | 6.9 | 6.8 |
CC(1/2) | 1.000 | 0.958 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Ammonium chloride, 20 % w/v PEG 3350 |