9MJC

Crystal structure of the VRC01-class antibody 4D01 derived from GT1.1 vaccination

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	NSLS-II BEAMLINE 17-ID-1
Synchrotron site	NSLS-II
Beamline	17-ID-1
Temperature [K]	100
Detector technology	PIXEL
Collection date	2024-09-25
Detector	DECTRIS EIGER X 9M
Wavelength(s)	0.920
Spacegroup name	P 21 21 21
Unit cell lengths	73.065, 89.957, 165.851
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	33.470 - 2.700
R-factor	0.2495
Rwork	0.247
R-free	0.28390
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.002
RMSD bond angle	0.489
Data reduction software	autoPROC
Data scaling software	Aimless
Phasing software	PHASER
Refinement software	PHENIX (1.21.2_5419)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	33.470	2.730
High resolution limit [Å]	2.700	2.700
Number of reflections	30747	1498
<I/σ(I)>	8.5
Completeness [%]	100.0
Redundancy	13.5
CC(1/2)	0.990	0.819

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		293	20% PEG-8000, 0.2 M sodium chloride, 0.1 M phosphate-citrate pH 4.2