9LZM
Crystal structure of SARS-Cov-2 main protease in complex with Pomotrelvir
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL10U2 |
| Synchrotron site | SSRF |
| Beamline | BL10U2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-06-15 |
| Detector | DECTRIS EIGER2 X 16M |
| Wavelength(s) | 0.979183 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 55.212, 98.464, 58.891 |
| Unit cell angles | 90.00, 108.21, 90.00 |
Refinement procedure
| Resolution | 33.400 - 1.940 |
| R-factor | 0.197421880682 |
| Rwork | 0.195 |
| R-free | 0.24011 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.871 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 55.940 | 1.990 |
| High resolution limit [Å] | 1.940 | 1.940 |
| Rmerge | 0.088 | 0.234 |
| Number of reflections | 43909 | 2940 |
| <I/σ(I)> | 10.3 | |
| Completeness [%] | 99.1 | |
| Redundancy | 5.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M HEPES 7.5, 20% PEG 10000 |
