Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9LCM

Grimontia hollisae thermostable direct hemolysin in complex with 6-nt blunt-ended dsDNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-22
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)1.0
Spacegroup nameC 2 2 21
Unit cell lengths112.844, 122.556, 60.840
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.670 - 1.820
R-factor0.16636
Rwork0.165
R-free0.19507
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.470
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0415)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.6701.850
High resolution limit [Å]1.8201.820
Number of reflections379991843
<I/σ(I)>26
Completeness [%]99.9
Redundancy7.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29330% (v/v) MPD, 100 mM Sodium acetate/ Hydrochloric acid pH 4.6, 20 mM Calcium chloride

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon