Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9L4P

Arabidopsis thaliana protease-associated domain of vacuolar sorting receptor 1 in complexed with vicilin-like seed storage protein 22 C-terminal pentapeptide SDRFV (pH 7.0)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E
Temperature [K]93
Detector technologyPIXEL
Collection date2023-05-14
DetectorDECTRIS EIGER R 4M
Wavelength(s)1.5419
Spacegroup nameP 1 21 1
Unit cell lengths32.701, 60.435, 39.206
Unit cell angles90.00, 113.29, 90.00
Refinement procedure
Resolution30.220 - 1.950
R-factor0.1773
Rwork0.174
R-free0.23670
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.810
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.0102.000
High resolution limit [Å]1.9501.950
Number of reflections10101713
<I/σ(I)>8.4
Completeness [%]98.1
Redundancy2.9
CC(1/2)0.9960.788
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7289.150.1 M MES pH 7.0 25% (w/v) PEG 6000

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon