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9L4O

Arabidopsis thaliana protease-associated domain of vacuolar sorting receptor 1 in complexed with vicilin-like seed storage protein 22 C-terminal pentapeptide SDRFV (pH 5.8)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E SUPERBRIGHT
Temperature [K]93
Detector technologyPIXEL
Collection date2023-05-12
DetectorDECTRIS EIGER R 4M
Wavelength(s)1.5419
Spacegroup nameP 1 21 1
Unit cell lengths32.658, 60.384, 39.245
Unit cell angles90.00, 113.38, 90.00
Refinement procedure
Resolution30.190 - 1.900
R-factor0.1708
Rwork0.169
R-free0.21570
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.807
Data reduction softwareXDS (VERSION Jan 10, 2022 BUILT=20220820)
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21 1-5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]36.0201.940
High resolution limit [Å]1.9001.900
Number of reflections108902236
<I/σ(I)>19
Completeness [%]98.2
Redundancy3.7
CC(1/2)0.9990.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.8289.150.1 M MES pH 5.8 30% (w/v) PEG 6000

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