9KO5
Crystal structure of Agrobacterium tumefaciens PmtA with 5'-methylthioadenosine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32XU |
| Synchrotron site | SPring-8 |
| Beamline | BL32XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-07-21 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 69.611, 76.394, 87.227 |
| Unit cell angles | 90.00, 105.56, 90.00 |
Refinement procedure
| Resolution | 46.700 - 2.040 |
| R-factor | 0.1722 |
| Rwork | 0.170 |
| R-free | 0.20910 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.828 |
| Data reduction software | XDS |
| Data scaling software | XDS |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.14_3260)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.160 |
| High resolution limit [Å] | 2.040 | 2.040 |
| Rmerge | 0.322 | 2.055 |
| Rmeas | 0.358 | 2.275 |
| Number of reflections | 64020 | 8449 |
| <I/σ(I)> | 7.1 | 1.1 |
| Completeness [%] | 99.3 | |
| Redundancy | 5.3 | |
| CC(1/2) | 0.984 | 0.409 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2M lithium sulfate, 0.1M Tris-HCl pH 8.0, 25% polyethylene glycol 3350 |
