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9KGQ

Discovery of an orally bioavailable reversible covalent SARS-CoV-2 Mpro inhibitor with pan-coronavirus activity

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2020-10-16
DetectorADSC QUANTUM 315r
Wavelength(s)0.95365
Spacegroup nameP 1 21 1
Unit cell lengths55.660, 99.294, 59.927
Unit cell angles90.00, 108.66, 90.00
Refinement procedure
Resolution46.570 - 1.500
R-factor0.2011
Rwork0.200
R-free0.23340
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6y2g
RMSD bond length0.012
RMSD bond angle1.238
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.5701.520
High resolution limit [Å]1.5001.500
Number of reflections971414491
<I/σ(I)>8.4
Completeness [%]98.2
Redundancy3.5
CC(1/2)0.9990.409
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2934% v/v TacsimateTM pH 6.0, 12% w/v Polyethylene glycol 3,350

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