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9KGN

Discovery of an orally bioavailable reversible covalent SARS-CoV-2 Mpro inhibitor with pan-coronavirus activity

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2020-07-14
DetectorADSC QUANTUM 315r
Wavelength(s)0.95365
Spacegroup nameP 1 21 1
Unit cell lengths55.461, 98.659, 59.735
Unit cell angles90.00, 108.93, 90.00
Refinement procedure
Resolution46.740 - 1.890
R-factor0.1851
Rwork0.183
R-free0.22610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6y2g
RMSD bond length0.005
RMSD bond angle0.751
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.0301.930
High resolution limit [Å]1.8901.890
Number of reflections479522877
<I/σ(I)>8.5
Completeness [%]98.1
Redundancy7.6
CC(1/2)0.9980.552
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.02 M Citric acid, 0.08 M BIS-TRIS propane pH 8.8, 16% w/v Polyethylene glycol 3,350

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