Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9J47

ScdA cysteine-free mutant from Staphylococcus aureus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]297.15
Detector technologyPIXEL
Collection date2024-05-01
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)0.99987
Spacegroup nameP 21 21 21
Unit cell lengths69.538, 92.492, 110.889
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.070 - 2.380
R-factor0.2203
Rwork0.218
R-free0.25220
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle0.961
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]28.0702.770
High resolution limit [Å]2.3802.380
Rmerge0.084
Rmeas0.0920.799
Rpim0.0370.324
Number of reflections29149293628
<I/σ(I)>11.7
Completeness [%]99.3
Redundancy6.1
CC(1/2)0.9960.858
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP297.150.24 M calcium chloride 0.1 M MES 5.6 20 % w/v PEG 6000 0.1 M b-Nicotinamide adenine dinucleotide hydrate

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon