9J1O
Mouse Spi-B Ets domain in complex with DNA containing GGAA sequence
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-13 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.200, 54.870, 100.790 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.120 - 2.230 |
R-factor | 0.2301 |
Rwork | 0.228 |
R-free | 0.27510 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.867 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 2.290 |
High resolution limit [Å] | 2.230 | 2.230 |
Rmerge | 0.067 | 0.741 |
Number of reflections | 9454 | 4418 |
<I/σ(I)> | 18.06 | 2.3 |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 6.17 | 6.42 |
CC(1/2) | 0.999 | 0.841 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293.15 | 0.1M MES pH5.6, 7.6% PEG8000, 8.0% Ethylene Glycol |