9IZ3
Crystal structure of phosphonopyruvate decarboxylase RhiEF from Bacillus subtilis ATCC6633
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2017-11-25 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0000 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 176.991, 176.991, 68.600 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 40.980 - 2.460 |
R-factor | 0.2412 |
Rwork | 0.239 |
R-free | 0.27170 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.860 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.260 | 2.550 |
High resolution limit [Å] | 2.460 | 2.460 |
Rpim | 0.026 | 0.470 |
Number of reflections | 44917 | 4670 |
<I/σ(I)> | 18 | 2 |
Completeness [%] | 99.8 | 99.7 |
Redundancy | 10.3 | 10.5 |
CC(1/2) | 0.999 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 1.3M ammonium sulfate, 0.1M sodium citrate, 4% v/v tert-butanol |