9IX1
Crystal structure of the mouse RIP3 kinase domain in complexed with PP2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-30 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9790 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 155.897, 51.147, 106.839 |
Unit cell angles | 90.00, 132.72, 90.00 |
Refinement procedure
Resolution | 39.240 - 2.310 |
R-factor | 0.2212 |
Rwork | 0.219 |
R-free | 0.25520 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4m66 |
RMSD bond length | 0.005 |
RMSD bond angle | 0.860 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.490 | 2.430 |
High resolution limit [Å] | 2.310 | 2.310 |
Rmerge | 0.078 | 0.474 |
Rmeas | 0.089 | 0.569 |
Rpim | 0.042 | 0.311 |
Total number of observations | 113945 | 12950 |
Number of reflections | 27060 | 4000 |
<I/σ(I)> | 12.5 | 2.9 |
Completeness [%] | 98.3 | |
Redundancy | 4.2 | 3.2 |
CC(1/2) | 0.996 | 0.831 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 10-20% FEG3350, 50 mM magnesium formate, pH 5.0-7.5 |