9IWM
X-ray structure of human PPARalpha ligand binding domain-GW7647-TRAP220 coactivator peptide co-crystals obtained by cross-seeding
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-12-23 |
| Detector | DECTRIS PILATUS3 S 2M |
| Wavelength(s) | 1.00000 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 45.012, 61.916, 52.944 |
| Unit cell angles | 90.00, 106.61, 90.00 |
Refinement procedure
| Resolution | 43.130 - 1.390 |
| R-factor | 0.1845 |
| Rwork | 0.183 |
| R-free | 0.20480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.351 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.11.1_2575-000)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 43.130 | 1.410 |
| High resolution limit [Å] | 1.390 | 1.390 |
| Rmerge | 0.035 | 0.341 |
| Rmeas | 0.042 | 0.403 |
| Rpim | 0.022 | 0.213 |
| Total number of observations | 186839 | |
| Number of reflections | 54656 | 2641 |
| <I/σ(I)> | 17.1 | 3.2 |
| Completeness [%] | 97.5 | 95.7 |
| Redundancy | 3.4 | 3.4 |
| CC(1/2) | 0.999 | 0.924 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 277 | 0.1M Tris (pH 8.5), 25% PEG 3350, 0.2M Ammonium acetate |






