9IKH
Bovine Heart Cytochrome c Oxidase in the Nitrous Oxide-bound Fully Oxidized State
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 90 |
Detector technology | PIXEL |
Collection date | 2023-10-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 182.100, 204.300, 177.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 1.750 |
R-factor | 0.13979 |
Rwork | 0.138 |
R-free | 0.17352 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8h8r |
RMSD bond length | 0.016 |
RMSD bond angle | 1.951 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 200.000 | 1.800 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmeas | 0.113 | 2.910 |
Number of reflections | 1292429 | 95800 |
<I/σ(I)> | 14.1 | 1.19 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.2 | 14.5 |
CC(1/2) | 0.999 | 0.695 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 6.8 | 277 | 40 mM sodium phosphate buffer, pH 6.8 0.2% (w/v) decyl-maltoside 1% (w/v) polyethylene glycol 4000 |