9HT4
Crystal structure of PA0884, the SBP component of a Pseudomonas aeruginosa PAO1 Tripartite ATP-independent Periplasmic (TRAP) transporter, complexed with succinate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-21 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 33.957, 118.525, 167.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.440 - 1.750 |
R-factor | 0.20307 |
Rwork | 0.201 |
R-free | 0.24125 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 2.553 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0419) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.440 | 50.440 | 1.780 |
High resolution limit [Å] | 1.750 | 9.090 | 1.750 |
Rmerge | 0.402 | 0.055 | 5.210 |
Rmeas | 0.434 | 0.060 | 5.662 |
Rpim | 0.165 | 0.022 | 2.205 |
Number of reflections | 69593 | 6845 | 6845 |
<I/σ(I)> | 5.3 | ||
Completeness [%] | 100.0 | 99.5 | |
Redundancy | 13 | 11.3 | 12.6 |
CC(1/2) | 0.992 | 0.999 | 0.199 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | JCSG-plus HT-96 D12: 0.04 M Potassium phosphate monobasic, 16 % w/v PEG 8000, 20 % v/v Glycerol |