9HST
Crystal structure of C-terminal catalytic domain of Plasmodium falciparum CTP:phosphocholine cytidylyltransferase with piperazin-2-one
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-07 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.96577 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 50.480, 69.940, 118.565 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 60.240 - 2.390 |
R-factor | 0.2246 |
Rwork | 0.223 |
R-free | 0.25120 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.826 |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.240 | 2.480 |
High resolution limit [Å] | 2.390 | 2.390 |
Rmerge | 0.112 | 2.178 |
Rmeas | 0.119 | 2.304 |
Rpim | 0.039 | 0.745 |
Total number of observations | 8354 | |
Number of reflections | 16062 | 880 |
<I/σ(I)> | 13.1 | 1 |
Completeness [%] | 99.9 | |
Redundancy | 9 | 9.5 |
CC(1/2) | 0.999 | 0.516 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | PEG 3350 11.5%, NaF 210 mM, Glycerol 5.8%, MnCl2 15mM, 1,3 propandiol 3% |