9HN6
X-ray structure of the adduct formed upon reaction of the diiodido analogue of picoplatin with ribonuclease A
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-05 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 100.040, 32.640, 73.450 |
Unit cell angles | 90.00, 90.11, 90.00 |
Refinement procedure
Resolution | 73.450 - 1.770 |
Rwork | 0.208 |
R-free | 0.27610 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.680 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 73.450 | 1.800 |
High resolution limit [Å] | 1.770 | 1.770 |
Rmerge | 0.077 | 0.881 |
Rmeas | 0.085 | 0.966 |
Rpim | 0.035 | 0.393 |
Number of reflections | 23489 | 6936 |
<I/σ(I)> | 12 | 2.4 |
Completeness [%] | 99.7 | 100 |
Redundancy | 5.7 | 5.9 |
CC(1/2) | 0.997 | 0.860 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.1 | 293 | 20% PEG4000, and 0.1 M sodium citrate pH 5.1 |