9H5W
X-ray structure of Hydrogenosomal processing peptidase (HPP), E56Q inactive mutant, from Trichomonas vaginalis co-crystallized with presequence peptide from adenylate kinase (AK) - not visible in the structure model
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | BESSY BEAMLINE 14.2 |
| Synchrotron site | BESSY |
| Beamline | 14.2 |
| Temperature [K] | 90 |
| Detector technology | CCD |
| Collection date | 2014-03-26 |
| Detector | RAYONIX MX-225 |
| Wavelength(s) | 0.918 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 87.788, 114.442, 124.633 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 48.000 - 2.000 |
| R-factor | 0.20227 |
| Rwork | 0.201 |
| R-free | 0.22853 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.593 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.000 | 2.040 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.126 | 1.859 |
| Rmeas | 0.141 | 2.072 |
| Rpim | 0.062 | 0.903 |
| Total number of observations | 22339 | |
| Number of reflections | 85304 | 4465 |
| <I/σ(I)> | 11.8 | 1 |
| Completeness [%] | 99.9 | |
| Redundancy | 5 | 5 |
| CC(1/2) | 0.997 | 0.327 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | substrate co-crystallized MLSTLAKRF/ASGKKDRM 0.1 M MES buffer [pH 5.0], 2.4 M ammonium sulfate, 0.2 mM n-dodecylmaltoside |






