9H0F
SARS-CoV-2 Mpro in complex with a silicon-containing inhibitor
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2024-07-04 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.640, 99.110, 103.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 55.870 - 2.090 |
R-factor | 0.2042 |
Rwork | 0.203 |
R-free | 0.23310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond angle | 0.626 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.21.2_5419: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.630 | 2.140 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.209 | |
Rmeas | 0.218 | |
Number of reflections | 45994 | 1076 |
<I/σ(I)> | 6.2 | |
Completeness [%] | 95.7 | |
Redundancy | 12.9 | |
CC(1/2) | 0.989 | 0.252 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M MES pH 6.5, 15% PEG4K, 5% DMSO |