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9GY1

High resolution crystal structure of StM23 peptidoglycan hydrolase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-11
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0332
Spacegroup nameP 61
Unit cell lengths52.690, 52.690, 77.490
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution39.320 - 1.350
R-factor0.1228
Rwork0.122
R-free0.14400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4zyb
RMSD bond length0.009
RMSD bond angle1.085
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.3201.430
High resolution limit [Å]1.3501.350
Number of reflections528388497
<I/σ(I)>36.51
Completeness [%]99.9100
Redundancy6.6
CC(1/2)0.9901.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.05 Sodium cacodylate trihydrate pH 6.5; 0.08 M Magnesium Acetate tetrahydrate and 30% w/v Polyethylene glycol 4000

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