9GY1
High resolution crystal structure of StM23 peptidoglycan hydrolase
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P14 (MX2) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-03-11 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0332 |
| Spacegroup name | P 61 |
| Unit cell lengths | 52.690, 52.690, 77.490 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 39.320 - 1.350 |
| R-factor | 0.1228 |
| Rwork | 0.122 |
| R-free | 0.14400 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4zyb |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.085 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.320 | 1.430 |
| High resolution limit [Å] | 1.350 | 1.350 |
| Number of reflections | 52838 | 8497 |
| <I/σ(I)> | 36.51 | |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 6.6 | |
| CC(1/2) | 0.990 | 1.000 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.05 Sodium cacodylate trihydrate pH 6.5; 0.08 M Magnesium Acetate tetrahydrate and 30% w/v Polyethylene glycol 4000 |






