Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9GXF

Crystal structure of Lotus japonicus CHIP13 extracellular domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-17
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.97
Spacegroup nameP 21 21 21
Unit cell lengths58.739, 91.902, 92.070
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.490 - 1.640
R-factor0.177
Rwork0.176
R-free0.20070
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.867
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.1_5286)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.4901.680
High resolution limit [Å]1.6401.640
Rmeas0.0922.612
Rpim0.0250.701
Number of reflections616714077
<I/σ(I)>14.610.89
Completeness [%]99.8
Redundancy13.5
CC(1/2)0.9990.416
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP292.150.1 M NaAc . 3H2O pH 4.5 23% PEG-3350

251174

PDB entries from 2026-03-25

PDB statisticsPDBj update infoContact PDBjnumon