9GL5
X-ray structure of the Thermus thermophilus Q190E mutant of the PilF-GSPIIB domain in the c-di-GMP bound state
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
| Synchrotron site | PETRA III, EMBL c/o DESY |
| Beamline | P13 (MX1) |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-08-05 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.976 |
| Spacegroup name | H 3 |
| Unit cell lengths | 107.966, 107.966, 86.366 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 32.710 - 1.900 |
| R-factor | 0.1944 |
| Rwork | 0.193 |
| R-free | 0.22510 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.064 |
| Data reduction software | XDS |
| Data scaling software | autoPROC |
| Phasing software | PHENIX |
| Refinement software | PHENIX (v1.17.1-3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 32.710 | 1.968 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rmerge | 0.105 | |
| Rmeas | 0.111 | |
| Rpim | 0.034 | |
| Number of reflections | 29580 | 2977 |
| <I/σ(I)> | 10.12 | |
| Completeness [%] | 100.0 | |
| Redundancy | 10.4 | |
| CC(1/2) | 0.997 | 0.636 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 1.6M LiSO4 0.1 M Sodiumacetate pH 7.0 |






