Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9GKU

Crystal Structure of Propanil hydrolase (PrpH) from Sphingomonas sp. Y57

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-17
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.976200
Spacegroup nameP 1
Unit cell lengths103.861, 103.698, 104.499
Unit cell angles113.60, 93.00, 120.61
Refinement procedure
Resolution44.560 - 1.480
R-factor0.1743
Rwork0.173
R-free0.19860
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.850
Data reduction softwareXDS (version february 5, 2021)
Data scaling softwareXDS (version february 5, 2021)
Phasing softwarePHASER (v3.55.2)
Refinement softwareREFMAC (5.8.0419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.5691.570
High resolution limit [Å]1.4801.480
Rmeas0.076
Number of reflections49365656793
<I/σ(I)>9.1
Completeness [%]90.864.6
Redundancy3.4
CC(1/2)0.9970.665
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52934% tacsimate pH 6 12% (w/v) PEG3350

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon