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9GJV

Fab fragment of an antibody that recognises alpha-1 antitrypsin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-05-05
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.8856
Spacegroup nameP 21 21 21
Unit cell lengths41.766, 58.618, 158.839
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution54.990 - 2.200
R-factor0.2451
Rwork0.244
R-free0.26220
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.505
Data reduction softwareXDS
Data scaling softwareAimless (0.7.13)
Phasing softwarePHASER (2.82)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]58.6202.270
High resolution limit [Å]2.2002.200
Rmerge0.1121.802
Rmeas0.1191.913
Rpim0.0400.619
Total number of observations16354214488
Number of reflections200621721
<I/σ(I)>10.31.2
Completeness [%]98.2
Redundancy8.28.4
CC(1/2)0.9970.475
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5293100 mM HEPES free acid, pH 7.5, 200 mM Magnesium chloride, 25 (%w/v) PEG 3350 Cryoprotectant: 10% ethylene glycol

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PDB entries from 2025-12-03

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