9GFR
Crystal structure of anti-collagen type II antibody Fab (PC12) complexed with collagen triple helical peptide (THP59)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I03 |
| Synchrotron site | Diamond |
| Beamline | I03 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2014-11-23 |
| Detector | DECTRIS PILATUS 12M |
| Wavelength(s) | 0.91842 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 46.555, 69.845, 240.356 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.750 - 2.060 |
| R-factor | 0.20632 |
| Rwork | 0.204 |
| R-free | 0.24708 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.579 |
| Data reduction software | xia2 |
| Data scaling software | XDS |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.710 | 2.100 |
| High resolution limit [Å] | 2.060 | 2.060 |
| Rmerge | 0.086 | 0.747 |
| Rmeas | 0.095 | |
| Rpim | 0.039 | |
| Number of reflections | 47799 | 3737 |
| <I/σ(I)> | 13.3 | 2 |
| Completeness [%] | 96.2 | 98.1 |
| Redundancy | 5.4 | 5.5 |
| CC(1/2) | 0.998 | 0.763 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 296 | 0.2 M sodium chloride, 0.1 M sodium acetate pH 5, 20% (w/v) PEG 6000 |
