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9G4Q

Crystal structure of the salivarius-1 RNA motif

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2018-11-29
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9198
Spacegroup nameP 21 21 21
Unit cell lengths49.409, 68.094, 99.339
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.240 - 1.990
R-factor0.226
Rwork0.225
R-free0.25500
Structure solution methodSAD
RMSD bond length0.002
RMSD bond angle1.020
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]56.1702.020
High resolution limit [Å]1.9901.990
Rmerge0.1093.504
Rpim0.0220.697
Number of reflections441101125
<I/σ(I)>15.6
Completeness [%]100.098.51
Redundancy25.325.8
CC(1/2)1.0000.680
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62900.04 M Magnesium Acetate, 0.05 M Sodium Cacodylate pH 6.0, 30% v/v 2-Methyl-2,4-pentanediol

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PDB entries from 2026-04-08

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