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9G4P

Crystal structure of the skipping-rope RNA motif.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2018-02-02
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9196
Spacegroup nameP 61
Unit cell lengths113.478, 113.478, 59.286
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution37.830 - 2.900
R-factor0.195
Rwork0.193
R-free0.23200
Structure solution methodSAD
RMSD bond length0.004
RMSD bond angle0.822
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]98.2802.950
High resolution limit [Å]2.9002.900
Rmerge0.0951.091
Rpim0.0220.247
Number of reflections18131473
<I/σ(I)>16.48
Completeness [%]100.0100
Redundancy19.7420.1
CC(1/2)1.0000.280
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52900.001M Spermine tetrahydrochloride 0.05M MES6.5 30% v/v PEG 400

250835

PDB entries from 2026-03-18

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