Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9FVZ

Aspartyl/Asparaginyl beta-hydroxylase (AspH) in complex with Fe, 2-oxoglutarate and a Factor X derived peptide fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2023-08-02
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths49.617, 86.042, 123.942
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.290 - 1.980
R-factor0.1855
Rwork0.184
R-free0.21300
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.499
Data reduction softwarexia2
Data scaling softwareDIALS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.3002.030
High resolution limit [Å]1.9801.980
Rmerge0.1301.598
Rpim0.0370.446
Number of reflections395741978
<I/σ(I)>110.8
Completeness [%]100.0100
Redundancy13.413.6
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52780.1 M bis tris propane pH 7.5, 0.2 M NaBr, 20% PEG 3350

250359

PDB entries from 2026-03-11

PDB statisticsPDBj update infoContact PDBjnumon