9FVS
Crystal structure of Heme-Oxygenase mutant G139A from Corynebacterium diphtheriae complexed with Cobalt-porphyrine (HumO-Co(III))
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID30B |
Synchrotron site | ESRF |
Beamline | ID30B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-04-24 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.87313 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.932, 55.111, 76.307 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.680 - 1.400 |
R-factor | 0.1753 |
Rwork | 0.175 |
R-free | 0.18870 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.563 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.680 | 1.420 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmeas | 0.187 | 3.010 |
Number of reflections | 39800 | 1969 |
<I/σ(I)> | 7.3 | |
Completeness [%] | 98.8 | 97 |
Redundancy | 7.4 | 7.4 |
CC(1/2) | 0.997 | 0.343 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 294 | 20% PEG3350, 200 mM magnesium formate pH 5.9 |