9FEI
Crystal structure of protein D: defoliating toxin form Fusarium oxysporum f.sp. vasinfectum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-06-22 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 27.843, 50.031, 72.277 |
Unit cell angles | 90.00, 98.91, 90.00 |
Refinement procedure
Resolution | 71.400 - 1.470 |
R-factor | 0.16269 |
Rwork | 0.161 |
R-free | 0.18771 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.760 |
Data reduction software | XDS (BUILT 20220110) |
Data scaling software | Aimless (0.7.7) |
Phasing software | CRANK2 (2.0.315) |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 71.400 | 1.500 |
High resolution limit [Å] | 1.470 | 1.475 |
Rmerge | 0.083 | 0.734 |
Number of reflections | 33146 | 1619 |
<I/σ(I)> | 12.5 | 2.2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.6 | |
CC(1/2) | 0.993 | 0.775 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 294 | 0.1M Hepes pH=7.5 1.4 M sodium citrate Tribasic Dihydrate Protein concentration= 7. 6mg/ml Soaking with HgCl2 over night |