9F63
Crystal structure of Saccharomyces cerevisiae pH nine-sensitive protein 1 (PNS1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976400 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 67.449, 91.262, 108.372 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.290 - 2.730 |
R-factor | 0.2348 |
Rwork | 0.232 |
R-free | 0.28460 |
Structure solution method | SAD |
RMSD bond length | 0.007 |
RMSD bond angle | 0.852 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER (1.18.2_3874) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.470 | 2.860 |
High resolution limit [Å] | 2.730 | 2.730 |
Rmerge | 0.133 | 2.212 |
Rmeas | 0.145 | 2.399 |
Rpim | 0.057 | 0.922 |
Total number of observations | 118497 | 16041 |
Number of reflections | 18374 | 2397 |
<I/σ(I)> | 8.8 | 0.9 |
Completeness [%] | 100.0 | |
Redundancy | 6.4 | 6.7 |
CC(1/2) | 0.998 | 0.413 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 292 | 0.1M (NH4)2PO4, 0.1M HEPES 7.0, 32% PEG 400, 6mM TCEP |