9F5T
Ubiquitin C-terminal clippase BpJOS
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-24 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 89.610, 35.510, 117.640 |
Unit cell angles | 90.00, 102.20, 90.00 |
Refinement procedure
Resolution | 57.490 - 2.560 |
R-factor | 0.214 |
Rwork | 0.210 |
R-free | 0.25310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.555 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.000 | 114.980 | 2.620 |
High resolution limit [Å] | 2.560 | 11.440 | 2.560 |
Rmerge | 0.072 | 0.025 | 0.777 |
Rmeas | 0.089 | 0.031 | 1.046 |
Number of reflections | 22657 | 296 | 861 |
<I/σ(I)> | 10.45 | ||
Completeness [%] | 94.0 | ||
Redundancy | 2.81 | ||
CC(1/2) | 0.997 | 0.998 | 0.508 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9.5 | 293 | 0.1 M CHES pH 9.5; 22 % PEG 8000; 1:2 protein reservoir drop ration; cryoprotected with reservoir + 20% Glycerol |