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9EXF

Crystal structure of Yeast Clathrin Heavy Chain N-terminal domain bound to YAP1801 peptide (LIDM)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]196
Detector technologyPIXEL
Collection date2019-10-31
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths51.083, 89.739, 188.122
Unit cell angles90.00, 90.39, 90.00
Refinement procedure
Resolution65.013 - 1.950
Rwork0.181
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.517
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareMOLREP (11.7.02)
Refinement softwareREFMAC (5.8.0430 (refmacat 0.4.82))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]81.0001.980
High resolution limit [Å]1.9501.950
Rmerge0.1081.242
Rpim0.553
Number of reflections1168555172
<I/σ(I)>111.5
Completeness [%]95.386.3
Redundancy7.77.1
CC(1/2)0.9980.499
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52920.1M TRIS-HCl pH 8.5 0.28182M Lithium Sfate monohydrate 30% (w/v) PEG4000

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