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9EV6

Corynebacterium glutamicum pyruvate:quinone oxidoreductase (PQO), C-terminal truncated construct

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-05
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9655
Spacegroup nameP 1 21 1
Unit cell lengths100.554, 98.481, 110.515
Unit cell angles90.00, 90.84, 90.00
Refinement procedure
Resolution37.460 - 1.891
R-factor0.1698
Rwork0.168
R-free0.19680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)9ev5
RMSD bond length0.008
RMSD bond angle0.930
Data reduction softwareautoPROC
Data scaling softwareAimless (0.7.13)
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]110.499110.4992.017
High resolution limit [Å]1.8915.6331.891
Rmerge0.1350.0661.241
Rmeas0.1460.0711.338
Rpim0.0560.0280.498
Total number of observations9102114415947885
Number of reflections13366666836683
<I/σ(I)>7.2616.531.6
Completeness [%]95.499.966.7
Completeness (spherical) [%]77.799.922.2
Completeness (ellipsoidal) [%]95.499.966.7
Redundancy6.816.617.17
CC(1/2)0.9950.9950.604
Anomalous completeness (spherical)77.699.622.3
Anomalous completeness95.299.666.9
Anomalous redundancy3.53.53.6
CC(ano)-0.233-0.115-0.016
|DANO|/σ(DANO)0.60.40.7
Diffraction limitsPrincipal axes of ellipsoid fitted to diffraction cut-off surface
1.881 Å1.000, 1.000, 1.000
1.907 Å0.000, 0.000, 0.000
2.323 Å-0.024, -0.024, -0.024
Criteria used in determination of diffraction limitslocal <I/sigmaI> ≥ 1.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP629135 % methylpentanediol (MPD)

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PDB entries from 2024-09-11

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