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9EV4

Pyruvate:quinone oxidoreductase (PQO) from Corynebacterium glutamicum CS176

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-3
Synchrotron siteESRF
BeamlineMASSIF-3
Temperature [K]100
Detector technologyPIXEL
Collection date2021-09-03
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.9677
Spacegroup nameI 2 2 2
Unit cell lengths68.740, 120.022, 157.059
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution21.330 - 1.474
R-factor0.1647
Rwork0.163
R-free0.19030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)9ev3
RMSD bond length0.011
RMSD bond angle0.960
Data reduction softwareautoPROC
Data scaling softwareAimless (0.7.13)
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]62.97362.9731.667
High resolution limit [Å]1.4744.8401.474
Rmerge0.1050.0731.058
Rmeas0.1090.0761.108
Rpim0.0290.0210.325
Total number of observations9173574526937608
Number of reflections6630133153315
<I/σ(I)>12.9231.072.29
Completeness [%]94.799.878.2
Completeness (spherical) [%]60.699.89.9
Completeness (ellipsoidal) [%]94.799.878.2
Redundancy13.8413.6611.34
CC(1/2)0.9970.9950.793
Anomalous completeness (spherical)59.799.89.3
Anomalous completeness94.699.876.7
Anomalous redundancy7.27.65.9
CC(ano)-0.0160.047-0.010
|DANO|/σ(DANO)0.70.70.7
Diffraction limitsPrincipal axes of ellipsoid fitted to diffraction cut-off surface
1.843 Å1.000, 1.000, 1.000
1.861 Å0.000, 0.000, 0.000
1.473 Å0.000, 0.000, 0.000
Criteria used in determination of diffraction limitslocal <I/sigmaI> ≥ 1.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.529125 % (w/v) PEG 4000, 8 % (v/v) isopropanol, 0.1 M sodium acetate

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